Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTNDFDFYLPEELIAQTPLEKRDASKLLVID---HKNKTMTDSHFDHILDELKP-GDALVMNNTRVLPARLYGEKPDTHGHIELLLLKNTEGDQWEVLAKPAKRLRVGTKVSFGDGRLIATVTKELEHGGRIVEFSYDGIFLEVLESLGEMPLPPYIHEKLEDRDRYQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEMHSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKPGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGDAMFVK-- |
1U9T Chain:A ((1-337)) | --MNHYTRWLELKEQARDIAGLMNIREAELAFARVTHDAWRMHGDIRDILAALESVGETKCICRNEYAVHEQVGTFTNQHLNGHAGLILNPRALDLRLFLNQWASVFHIKENTARGERQSIQFFDHQGDALLKVYATDNTDMAAWSELLARFITDE--NTPLELKVVQTRADATVVEQEWRAMTDVHQFFTLLKRHNL--------TRQQAFNLVADDLACKVSNSALAQILESAQQDGNEIMVFVGNRGCVQIFTG--VVEKVVPMKGWLNIF----NPTFTLHLLEE---SIAEAWVTRKPTSDGYVTSLELFAHDGTQIAQLYGQRTEGDQEQAQWRKQIASLIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40925 for 2462 contacts (-16.6/contact) +
2D Compatibility (PS) -33394 + (NN) -6832 + (LL) 1964
1D Compatibility (HY) 2800 + (ID) 1550
Total energy: -77937.0 ( -31.66 by residue)
QMean score : 0.205
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