Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIIGIFSLIIIAILAWQGFSFLKHKEIKLQQAVVEKE-I-RIAEKTVEVVKRQKTERVLFLEPKGY-------DKSLSADILKWNQKSFEHKKFYDNQYIILRPQLADSNFANVKKLSIYQILYQKEKGSMFQKSSRLLRTYLLDQNKKPFELDELLAHNI---SGFKAILENIAPGTQLKEHDSNKEFLKTGRVTDGLDVKDGKLII-ND-LKLPLDKLYNVIDESYLKSSDLDLVSNL--KAKAPRVALTFDDGPNEKTTPKALEILKRYNAKATFFVMGQSAVGHTDILQRMHAEGHEIGNHTWDHPNLTKLPAEKIKEEIHKTNDLIMKATGQKPVYLRPPYGATNATVKTVTGLKEMLWSVDTEDWKNHNTQAMMTNIKKQLRPGGVILMHDIHQTSIDALPTIMDYLITQGYYFVTVGELYSTP |
| 2C1I Chain:A ((14-418)) | ----------------------------FEQKIESLKKEKDDQLSEGNQKEHFRQGQAEVIA-YYPLQGEKVISSVRELINQDVK---D--K--L-ESKDNLVFYYTEQEESGLKGVVNRNVTKQIYD-----IEETEKTSLGKVHLTEDGQPFTLDQLFSDASKAKEQLIKELTSF------------------DLSAWNFDYKDSQIILY--EIALPVSAFFDVIQSSYLLEKDAALYQSYFDKKHQKVVALTFNDGPNPATTPQVLETLAKYDIKATFFVLGKNVSGNEDLVKRIKSEGHVVGNHSWSHPILSQLSLDEAKKQITDTEDVLTKVLGSSSKLMRPPYGAITDDIRNSLDLSFIMWDVDSLDWKSKNEASILTEIQHQVANGSIVLMHDIHSPTVNALPRVIEYLKNQGYTFVTIPEMLNTR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100096 for 2651 contacts (-37.8/contact) +
2D Compatibility (PS) -37871 + (NN) -10824 + (LL) 4396
1D Compatibility (HY) -24800 + (ID) 5450
Total energy: -174645.0 ( -65.88 by residue)
QMean score : 0.462
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