Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYLEQLKEVNPLTICITNNVVKNFTANGLLALGASPAMSECIEDLEDLLKVANALLINIGTLTKESWQLYQEAIKIANKNQVPVVLDPVAAGASRFRL----E-VSLDLLKNYSISLLRGNGSEIAALVGEKQASKGADGGKVADLESIAVKANQVFDV-PVVVT-GETD------AIAVRG--EVRLLQNGSPLMPLVTGTGCLLGAVLAAFIGSSDRSDDLACLTEAMTVYNVSGEIAEKVAKGKGVGSFQVAFLDALSQMKSEMIMDK |
3RM5 Chain:A ((91-278)) | --------------------------------------------------KCNVIKT--GMLTAAAIEVLHEKLLQLGENRPKLVVDPVL-------GKDIVSLITEKVAP--FADILTPNIPECYKLLGEERK---VNGL--QDIFQIAKDLAKITKCSNILVKGGH--EKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTLASAIASNLARGYS--LPQSVYGGIEYVQNAVAIGCDVTKETVKDNGPINHVYAVEIPLEKMLSDE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101174 for 1132 contacts (-89.4/contact) +
2D Compatibility (PS) -16514 + (NN) -341 + (LL) 4404
1D Compatibility (HY) -6800 + (ID) 1450
Total energy: -121875.0 ( -107.66 by residue)
QMean score : 0.399
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