Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDAKFDFAKLLVYKAGQFIKSEMQNT--FDVEEKSRFDDLVTSLDKKTQKLLIQEIIQHYPDDNILAEEDDV-RSPIAQGNVWVLDPIDGTVNFIVQKDNFAVMLAYYEEGVGQFGIIYDVM-ADILYSGGGHFDVYANDKKIVPFQECPLERCLLGVNSAMYAE----NDCGIAHLASETLGVRIYGGAGISMAKVMQGKLLAYFSY-IQPWDYAAAKIMGETLGFTLLTLDGEEPNYSTRQKVMFL-PKSKLNLIQSYLTKK
3LV0 Chain:A ((8-265))
-SAVMNVMVQAAMKAGRSLVRDYGEVQNLQVSL-KGPADYVSQADRKAEKIIFNELSKARPKFGFLMEESEEIIG-EDSQHRFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNPINDEL-FTAERGSGAFFNDRRCRVSARRRLEDCVIATGMPHL-PGHGTYLIELRNVMAEVSGIRRFGTAALDLAYVAAGRTDGFWEDNLQIWDMAAGILMVREAGGFVTDKEGGNDIFRK--KNIIAGNEHIRIKLERALKKG
General information:
TITO was launched using:
RESULT:
Template:
3LV0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181974 for 2182 contacts (-83.4/contact) +
2D Compatibility (PS) -26862 + (NN) -12678 + (LL) 672
1D Compatibility (HY) -7600 + (ID) 2700
Total energy: -231142.0 ( -105.93 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_3LV0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LV0-query.scw
PDB file :
Tito_Scwrl_3LV0.pdb
: