Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPQTLRRLDVKKQFIEKIEPFAHRQTLKSKAVNSSKTTMSIQRYNHSGTKIQLRIGYSKVLIRIFSNGKINLTHYDLFFDREETLEITDAFDNGVYTQDEVDGFIKQAKTFIKQALKGEV
4O66 Chain:A ((10-76))
---------------------------------------FLRGACIKTGDRFRVKIGYNQELIAVFKS--LPSRHYDSFTKTWD------------FSMSDYRALMKAVERLSTVSLKPL-
General information:
TITO was launched using:
RESULT:
Template:
4O66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2947 for 361 contacts (-8.2/contact) +
2D Compatibility (PS) -6837 + (NN) -1609 + (LL) 3852
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -13441.0 ( -37.23 by residue)
QMean score : 0.227
(partial model without unconserved sides chains):
PDB file :
Tito_4O66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O66-query.scw
PDB file :
Tito_Scwrl_4O66.pdb
: