Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIVPATSANI----GP---GFD---SIGVALSKYLSIEVLEESTEWLVEHNLVNIPKDHTNLLIQTALHVKSD---LAPHRLKMFSDIPLARGLGSSSSVIVAGIELANQLGNLALSQKEKLEIATRLEGHPDNVAPAIFGDLVISSIVKNDIKSLEVMF-PDSSFIAFIPNYELKTSDSRNVLPQKLSYEDAVASSSVANVMVASLLKGDLVTAGWAIERDLFHERYRQPLVKEFGVIKQISTQNGAYATYLSGAGPTVMVLCSKEKEQPIVTELSKLCLDGQIQVLNIERKGVRVEKR |
| 2V8P Chain:A ((5-270)) | IKVLSPAKINLGLWVLGRLPSGYHEILTLYQEIPFYDEIYIRE-GV-LRVETNI-GI-PQEENLVYKGLREFERITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISA---DAPFFLLGKSAIGRGKGEV--LEPVETEISGKITLVIPQVSSSTGRVYSSLREEHFV-----TPEYAEEKIQRIISGEVEEIENVL-GDI-----ARELYPEINEVYRFVEYLG-FKPFVSGSGSTVYFFGGASE--ELKKAAKMR--GWKVVELEL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118720 for 2076 contacts (-57.2/contact) +
2D Compatibility (PS) -27488 + (NN) -5748 + (LL) 2992
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -160014.0 ( -77.08 by residue)
QMean score : 0.394
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