Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLNYLPSEFQKALPILKKIKKA----GYEAYFVGGSVRDVLLDRPIHDVDIATSSYPEETKQIFKRTV----DVGIEHGTVLVLE-KGGEYEITTFRTEEVYVDYRRPSQVNFVRSLEEDLKRRDFTVNAFALNED----GEVIDLFHGLDDLDNHLLRAVGLASERFNEDALRIMRGLRFSASLNFDIETTTFEAMKKHA--SLLEKISVERSFIEFDKLLLAPYWRKGMLALIDSHAFNYL-PCLKNRELQLS---AFLSQLDKDFLFETSEQAWASLILSMEVEH----TKTFLKKWKTSTHFQKDVEHIVDVYRIR-E--QMGLTKEHLYR----YGKTIIKQAEGIRKARGLMVDFEKIEQLDSELAIHDRHE-IVVNGGTLIKKLGIKPGPQMGDIISQIELAIVLGQLINEEEAILHFVKQYLMD |
| 3H38 Chain:A ((13-424)) | ------ERVDPKILNLFRLLGKFGDEVNMPVYVVGGFVRDLLLGIKNLDIDIVVEGNALEFAEYAKRFLPGKLVKHDKFMTASLFLKGGLRIDIATARLEYYESPAKLPD-VE-MSTIKKDLYRRDFTINAMAIKLNPKDFGLLIDFFGGYRDLKEGVIRVLHT--LSFVDDPTRILRAIRFEQRFDFRIEETTERLLKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSIRRMAQFDVIKHLFPKTYYTPSMDEKMENLFRNIPWVEENFGEVDRFYAVLHVFLEFYDDESWKEVRDRYSLRRNLINEIRHVEKSAPALLEMLSERVPASFVYPLVKGVSNETICHFLAYL--SG--EKEGLFKSYLLK---IKNTKLEKINGEYLIRK-GITSGKIIGEVLEKILMKKLDGDTRDEEEI-LEEVLASL-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3H38.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -74602 for 2866 contacts (-26.0/contact) +
2D Compatibility (PS) -40661 + (NN) -9636 + (LL) 2668
1D Compatibility (HY) -15200 + (ID) 4450
Total energy: -141881.0 ( -49.50 by residue)
QMean score : 0.378
|
|
|