Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKGQVNDTKQSYSLRKYKFGLASVILGPFIMVTSPVFADQTTSVQVNNQTGTSVDANNSSNETSASSVITSNNDSVQASDKVVNSQNTATKDITTPLVETKPMVEKTLPEQGNYVYSKETEVKNTPSKSAPVAFYAKKGDKVFYDQVFNKDNVKWISYKSFCGVRRYAAIESLDPSGGSETKAPTPVTNSGSNNQEKIATQGNYTFSHKVEVKNEAKVASPTQFTLDKGDRIFYDQILTIEGNQWLSYKSFNGVRRFVLLGKASSVEKTEDKEKVSPQPQARITKTGRLTISNETTTGFDILITNIKDDNGIAAVKVPVWTEQGGQDDIKWYTAVTTGDGNYKVAVSFADHKNEKGLYNIHLYYQEASGTLVGVTGTKVTVAGTNSSQEPIENGLAKTGVYNIIGSTEVKNEAKISSQTQFTLEKGDKINYDQVLTADGYQWISYKSYSGVRRYIPVKKLTTSSEKAKDEATKPTSYPNLPKTGTYTFTKTVDVKSQPKVSSPVEFNFQKGEKIHYDQVLVVDGHQWISYKSYSGIRRYIEI------ |
1Q9J Chain:A ((1-418)) | MFPGSVIRK---LSHSEEVFAQYEVFTSMTIQLRGVI---------DVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICVIDAELRLDQSVSLLHLQLILREG---------------GAELTLYLH---HCMADGHHGAVLVDELFS------RYTDAVTTGDP--GPITPQPTPL------SMEAVLAQRGIRKAERFMSVMYAYPGLPQAVPVTRL---------------WLSKQQTSDLMAFG--------------------------REHRL--SLNAVVAAAILLTEWQLRN------------------------------TPHVPIPYVYPVDLRFVLAPPVAPTEAT-NLLGAASYLAEIG-------------PNTDIVDLASDIVATLRADLANG---------------VIQQSGLH--FGTAFEGTPPGLPPLVFCTD----------ATSFPTMRTPPGL---EIEDIKGQFYCSISVPLDLYSCAVYAGQLIIEHHGHIAEPGKSLEAIRSLLCTVPSEYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 87547 for 3151 contacts (27.8/contact) +
2D Compatibility (PS) -39525 + (NN) 5176 + (LL) 7532
1D Compatibility (HY) -11600 + (ID) 3450
Total energy: 45680.0 ( 14.50 by residue)
QMean score : 0.116
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