Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQYSEIMIRYGELSTKKKNRMRFINKLKNNMEHVLSIYPDVSVKTDRDRGHVYLNGTDYHEVAESLKEIFGIQAFSPSFKVEKNVDTLVKAVQEIMTSVYKDGMTFKITAKRSDHSFELDSRALNHTLGDAVFSVLPNIKAQMKQPDINLKVEIRDEAAYISYENIRGAGGLPVGTSGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHFASPPYTSPGALKKAHDLTRKLTKFGGNIQFIEVPFTEIQEE----IKEKAPEAYLMTLTRRFMM-RITDRIRENRNGLVIINGESLGQVAS------QTLESMQAI---NAVTATPIIRPVVTMDKLEIIDIAQKIDTFDISIQPFEDCCTIFAPDRPKTNPKIKNTEQYEKRMDVEGLVERAVAGIMVTTIQPQADSDDVDDLIDDLL |
| 3BL5 Chain:A ((3-178)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KEKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYN-QRHSQEVEVAKSIAEKL---G--VKNHLLDMSLLNQLAPNALT------STFVPGRNLVFLSFASILAYQIGARHIITGVCE----GYPDCRDEFVKSCNVTVNLAMEKPFVIHTPLMWLNKAETWKLADELGALDFVKNNTLTCYNGIIADGCGECPACHLRSKGYEEYMVMK------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66297 for 1054 contacts (-62.9/contact) +
2D Compatibility (PS) -15515 + (NN) -4637 + (LL) 13996
1D Compatibility (HY) -8000 + (ID) 1350
Total energy: -81803.0 ( -77.61 by residue)
QMean score : 0.435
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