Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------MAEIDYKKVTGMIHSTESFGSVDGPGIRFIIFMQGC-KM-RCQYCHNPDTWEMETNNSKERTV-E-DVLKEALRYKHFWGKDGGITVSGGEAM-LQIDFITALFIEAKKLGIHTTLDTCGFAYRATPEYHAILEKLLDVTDLV-LLDLKEIDPEQHKIVTRQSNKNILQFARYLSDRGTPVWIRHVLVPGLTDIDDH-LKRLGEFVQTLDNVDKFEVLPYHTMGEFKWRELGIPYPLAGVKPPTPERVKNAKDIMKTESYTEYLKRIQN------------------------------------------------------------------------------ |
| 2A5H Chain:A ((3-411)) | NRRYELFKDVSDADWNDWRWQVRNRIETVEELKKYIPLTKEEEEGVAQCVKSLRMAITPYYLSLIDPNDPNDPVRKQAIPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPD----------RVLLLITDMCSMYCRHCTRRR------FAGQSDDSMPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREI---PHVEIVRIGSR----TPVVLPQRITPELVNMLKKYHPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQSVLLRGVNDCVHVMK-------ELVNKLVKIRVRPYYIY---QCDLSLGLEHFRTPVSKGIEIIEGLRGHTSGYCVPTFVVDAPGGGGKTPVMPNYVISQSHDKVILRNFEGVITTYSEPINYTPGCNCDVCTGKKKVHKVGVAGLLNGEGMALEPVGLERNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83467 for 1807 contacts (-46.2/contact) +
2D Compatibility (PS) -23530 + (NN) -3927 + (LL) 1440
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: -116534.0 ( -64.49 by residue)
QMean score : 0.307
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