Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKNTWKKLLVSTAALSVVAGGAIAATHSNSVDAASKTTIKLWVPTDSKASYKAIVKKFEKENKGVTVKMIESNDSKAQENVKKDP--SKAADVFSLPHDQLGQLVESGVIQEIPEQYSKEIAKNDTKQSLTGAQYKGKTYAFPFGIESQVLYYNKTKLTADDVKSYETITSKGKFGQ-QLKA--A------NSYV----TGPLFLSVGDTLFGKSGEDAKGTNWGNEAGVSVLKWIADQKKN--DGFVNL--TAENTMSKFGDGSVHAFESGPWDYDAAKKAVGEDKIGVAVYPTMKIGDKEVQQKAFLGVKLYAVNQAPAGSNTKRISASYKLAAYLTNAESQKIQFEKRHIVPANSSIQSSDSVQKDELAKAVIEMGSSDKYTTVMPKLSQMSTFWTESAAILSDTYSGKIKSSDYLKRLKQFDKDIAKTK |
2XD3 Chain:A ((36-406)) | --------------------------------------ELTVYVDEGYKSYIEEVAKAYEKE-AGVKVTLKTGDALGGLDKLSLDNQNGNVPDVMMAPYDRVGSLGSDGQLSEVKLSDG-AKTDDTTKSLV--TAANGKVYGAPAVIESLVMYYNKDLVKDA-PKTFADLENLAKDSKYAFAGEDGKTTAFLADWTNFYYTYGLLAGNGAYVFGQNGKDAKDIGLANDGSIVGINYAKSWYEKWPKGMQDTEGAGNLIQTQFQEGKTAAIIDGPWKAQAFKDA-K-VNYGVATIPTLPN-GKE--YAAFGGGKAWVIPQAVK-----NLEASQKFVDFLVATEQQKVLYDKTNEIPANTEARSYAEGKNDELTTAVIKQF---KNTQPLPNISQMSAVWDPAKNMLFDAVSGQKDAKTAANDAVTLIKETL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2XD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -43831 for 3051 contacts (-14.4/contact) +
2D Compatibility (PS) -37396 + (NN) -12004 + (LL) 3028
1D Compatibility (HY) -11600 + (ID) 4850
Total energy: -106653.0 ( -34.96 by residue)
QMean score : 0.368
|
|
|