Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTVYNINHGIGWASSGVEYAQAYRGSVLRKLGIDAKFIFTDFFSADNIISLTRNIGFQDKEIIWLYNFFSDIELAPTTFSI-EDLQKQYLGKLVRKEDKGRVIKFFYEDENIYLTVYLDNFNKDKVHRVEIVSNNNLIRKDYYSYTRTFSEYYYPKDGVAHLYQRRFYNEDESTAFLEMVENSSSRFIINGRLLPSKVAFFDYFLESMTFTSKDIILLDRGTDTAQSLLRHGKPAKLGTVVHAEHFSENAVTADTILWNNYYDYQFTNANRFDFFITSTDKQTELLEQQFKQFTNHNPRIITIPVGSIDNLKMPMDNRRPYSILTASRLASEKHVDWLVRAVIRIREILPEVTFDIYG-----------SGGEEEKIRNIINAANATEYIRLMG----HKNLSNVYQNYE----LYLTASKSEGFGLTLLEAIGAGLPLIGFDVRYGNQTFIKDGENGYLI-PRFDMDVEEAIVEAFKEKVLQLFQQDQKALREASYAIAEGFLTNEVEGKWYNLVKELVQDD----------------------------------------- |
| 3S28 Chain:A ((27-807)) | NEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVY--------DSEYCDILRVPFRTEKGIVRKWI-------------------------------SRFEVWPYLETYTEDAAVELSKELNGKPD---LIIGNYSDGNLVASLLAHKLG---VTQCTIA---HALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIIT-----STFQEIAGS--KETVGQYESH---TAFTLPGLYRVVHGID-----------------VFDPKFNIVSPGADM---SIYFPY------------TEEKRRLTKFHSEIEELLYSDV--------ENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKED--PSHWDEISKGGLQRIEEKYT------WQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLAQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130163 for 3167 contacts (-41.1/contact) +
2D Compatibility (PS) -41754 + (NN) -12066 + (LL) 6884
1D Compatibility (HY) -16000 + (ID) 3600
Total energy: -196699.0 ( -62.11 by residue)
QMean score : 0.358
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