Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVHITSIYGQSPRSIAL-ISQKLVKDVGRQLGYDEMGIYFYNDHAE-T---HGER-------S-------TRMDGIIAGLGRGDIVVFQVPTWNSTEFDELFLDKLQAY-GARIITFVHDIVPLMFESNFYLLDRVIDMY--NRSDVVILPTKAMHDYLIEKG-MTTSKVLYQEVWDHPVNIDL--------------PRPECQKVLSFAGDIQRFP----FVNDWK-------ENIPLIYYGDGSRL---------NSEANVHAQGWKDDVELMLSLSKRGGFGLCWSEDREELVERRYSRMNASYKLSTFLAAGLPIIANHDISSRDFIKQHGLGFTV-E--TLEEAVEKINNME--KETYDSYVENVEKIATLLRNGYITKKLLIDAVHMLYR |
| 2IW1 Chain:A ((2-368)) | -IVAFCLYKY-FP-FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHL-KEHPADRVVGFNKMPG---LDVYF---AADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSG--RNDVSELMA-AADLLLHP-----------AYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYAD-----TQDLYSLPEKAADIIT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164806 for 2415 contacts (-68.2/contact) +
2D Compatibility (PS) -32986 + (NN) -18358 + (LL) 2096
1D Compatibility (HY) 5200 + (ID) 1950
Total energy: -210804.0 ( -87.29 by residue)
QMean score : 0.326
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