Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILVLHTGGTISMNANE---KGQVMS--SADNPMKYVD-LSLDDLDLTVVDFLNLPSPQITPHHMLDIYHYLKQHASNFDGVVITHGTDTLEETAYFLDTMILPKIPIIITGAMRSTNELGSDGVYNYLSALRVANSTKAADKGVLVVMNDEIHAAKYVTKTHTTNVSTFQTPTHGPLGIIMKQDLLFFKATEERVR----FD--LDKITGTVPIVKAYAGMGDSGIISFLNSQNISGLVIEALGAGNMPPKAAQEIEELIEQGVPVVLVSRCFNGIAEPVYGYEGGGARLQESGVMFVKELNAPKARLKLLIALNAGLTGQNLKDYIEG |
| 1NNS Chain:A ((1-325)) | LPNITILATGGTIAGGGDSATKSNYTVGKVGVENLVNAVPQLKDI-ANVKGEQVVNIGSQDMNDNVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAG-YDGIVSAGVGNGNLYKSVFDTLATAAKTGTAVVRSSRVPTGATTQDA-----EVDDAKYGFVASGTLNPQKARVLLQLALTQTKDPQQIQQIFNQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NNS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230455 for 2762 contacts (-83.4/contact) +
2D Compatibility (PS) -33933 + (NN) -12519 + (LL) -476
1D Compatibility (HY) -13600 + (ID) 4650
Total energy: -295633.0 ( -107.04 by residue)
QMean score : 0.549
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