Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSFEELLATMTLITAAEIEDKIDSNQDFVLFIGRISCPFCHLFVPKIVEVADED-EFELFHLDSEDFDHWTANKEFRNKYDIPTVPGLMVVKNG-TI-KVKCDSKMTKEEIREFIG
2L6C Chain:A ((4-101))
----------IRDITTEAGMAHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARP------ELMKELGFERVPTLVFIRDGKVAKVFS-GIMNP-RELQALYA
General information:
TITO was launched using:
RESULT:
Template:
2L6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54770 for 656 contacts (-83.5/contact) +
2D Compatibility (PS) -9908 + (NN) -1781 + (LL) 1660
1D Compatibility (HY) -6000 + (ID) 800
Total energy: -71599.0 ( -109.14 by residue)
QMean score : 0.402
(partial model without unconserved sides chains):
PDB file :
Tito_2L6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L6C-query.scw
PDB file :
Tito_Scwrl_2L6C.pdb
: