Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQQYFVNGE---AGA-YVTIEDKDTIKHMFNVMRLTEDDQVVLVFDDAIKRLAKVVDSSAHRF--QILEELDNNVEMPVQVTIASGFPKGDKLDFVTQKATELGAAAIWGFPADWSVVKWDGKKLAKKEDKLAKIALGAAEQSKRNRLPQVRLFEKKADFQAELAGFDKIFIAYEESAKEGELSALAQNL---Q----TVKAGDKLLFIFGPEGGISPKEIAAFEEVGAIKVGLGPRIMRTETAPLYALSVISYSAELL |
| 1VHK Chain:A ((2-251)) | -QRYFIELTKQQIEEAPTFSITGEEVHHIVNVMRMNEGDQIICCSQDGFEAKCELQSVSKDKVSCLVIEWTNENRELPIKVYIASGLPKGDKLEWIIQKGTELGAHAFIPFQAARSVVK---------RERWTKIAKEAAEQSYRNEVPRVMDVHSFQQLLQRMQ---------DFDKCVVAYE------SAFSAIVSSLPKGSSLLIVFGPEGGLTEAEVERLTEQDGVTCGLGPRILRTETAPLYALSAISYQTELL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VHK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 37762 for 1622 contacts (23.3/contact) +
2D Compatibility (PS) -21807 + (NN) 8181 + (LL) 2096
1D Compatibility (HY) 7200 + (ID) 900
Total energy: 32532.0 ( 20.06 by residue)
QMean score : 0.097
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