Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFYTIEELVEQANSQHKGNIAELMIQTEIEMTGRSREEIRYIMSRNLEVMKASVIDGLTPSKSISGLTGGDAVKMDQYLQSGKTISDTTILAAVRNAMAVN----ELNAKMG-LVCATPTAGSAGCLPAVISTAIEKLNLTEEEQLDFLFTAGAFGLVIGNNASISGAEGGCQAEVGSASAMAAAALVMAAGGTPFQASQAIAFVIKNMLGLICDPVAGLVEVPCVKRNALGSSFALVAADMALAGIESQIPVDEVIDAMYQVGSSLPTAFRETAEGGLAATPTGRRYSKEIFGE |
2VQ2 Chain:A ((4-223)) | -----------ANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSDPK----------------NELAWLVRAEIYQYLKV-----NDKAQESFRQALSIKPDSAEINNNYGWFLCG---------------------RLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGD-ADYYFKKYQSRVEVLQADDLLLGWKIAKA--------LGNAQAAYEYEAQLQANFPYSEELQTVLT------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56442 for 1725 contacts (-32.7/contact) +
2D Compatibility (PS) -22746 + (NN) -5395 + (LL) 4648
1D Compatibility (HY) 2400 + (ID) 1800
Total energy: -79335.0 ( -45.99 by residue)
QMean score : 0.085
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