Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVEGVSLHLIKNQQFKTNHLTFRFSGDFNN---KTVARRSLVAQMLVTANAKYPKVQEFREKLASLYGASLSTKISTKGLVHIVDIDIVFVKNTFTLEQENIVEQIITFLEDMLFSPLISLEQYQTSIFDTEKKNLIQYLEADIEDNFYSSDLALKSLFYNNKTLRLPKYGTASLVESENSFTAYQEFQKMLKEDQLDIFVVGDFDDYRMIQAF-NRMAFEPRHKVLAFDYTQTYENITRSQVEDKDVNQSIMQLAYHLPITYKDEDYFALIVFNGLFGAF--------AHSLLFTEIREKQGLAYTIGSQFD--SFTGLFTIYAGIDKENRERFLKLINKQFNNIKMGRFSSTLLKQTKDILKMNYVLASDNPKVIVDHIYHEHYLD-QFHTSALFIDKVDDVTKSDIVSVATKLKL-QAFYFLEGN |
| 1PP9 Chain:B ((27-429)) | TRLPNGLVIASLENY-APASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGAS-SFKITRGIEAV-GGKLSVTSTRE----NMAYTVECLRD--------DVDILMEFLLNVTTAP-----EFRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAAYR-NALANSLYCPDYRIGKVTPVELHDYVQNHFTSARMALIGLG-VSHPVL-KQVAEQFLNIRGGLGLSG-AKAKYHGGEI-RE-QNGDSLVHAALVAESAA-IGSAEANAFSVLQHVLGAGPHVKRGSNATSSLYQAVAKGVHQPFDVSAFNASYSDSGLFGFYTISQAASAGDVIKAAYNQVKTIAQGNLSNPDVQAAKNKLKAGYLMSVESSEGFLDEVGSQALAAGSYTPPSTVLQQIDAVADADVINAAKKFVSGRKSMAASGN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -306062 for 3633 contacts (-84.2/contact) +
2D Compatibility (PS) -41296 + (NN) -12597 + (LL) 1908
1D Compatibility (HY) -7600 + (ID) 2450
Total energy: -368097.0 ( -101.32 by residue)
QMean score : 0.461
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