Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKLVSSLLKCSLIIIVSFAGGAFASFVMNHNDNIPNGGVTKTSKVNYNNITPTTKAVKKVQNSVVSVINYKQQESRSDLSDFYSHFFGNQGGNTDKGLQVY-GEGSGVIYKKDGKNAYVVTNNHVIDGAKQIEIQLADGSKAVGKLVGSDTYSDLAVVKI--PSDKVSNIAEFADSSKLNIGETAIAIGSPLGTEYANSVTQGIVSSLKRTVTMTNEEGQTVSTNAIQTDAAINPGNSGGALINIEGQVIGINSSKISSTSNQTSGQSSGNSVEGMGFAIPSNDVVKIINQLESNGQVERPALGISMAGLSNLPSDVISKLKIPSNVTNGIVVASIQSGM-PAQGKLKKYDVITKVDDKEVVSPSDLQSLLYGHQVGDSITVTFYRGENKQTVTIKLTKTSKDLAKQRANN |
3STJ Chain:B ((19-334)) | ----------------------------------------------------------LEKVLPAVVSVRVEGT--------------------------QPFEGLGSGVII--NASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPS-KLTQIA-IADSDKLRVGDFAVAVGNPFG--LGQTATSGIVSALGR--SGLNLEGL---ENFIQTDASINRGNSGGALLNLNGELIGINTAILA---------PGGGSV-GIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMS---ADIAKAFNL--DVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTS----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3STJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -113160 for 2523 contacts (-44.9/contact) +
2D Compatibility (PS) -31316 + (NN) -11662 + (LL) 4676
1D Compatibility (HY) -22400 + (ID) 6050
Total energy: -179912.0 ( -71.31 by residue)
QMean score : 0.483
|
|
|