Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKASVIIPAYNSKE-RLYNSLLSLNQQECDE-EFEVIVADNGSEDGTLSMLESFQADFPLIFTRIKENRGIAYGRNQALRNARGDILIFHDSDMLAAKDLVAKHIKAHENEENLVVCGLFWKRIYSFYYERFEEEHKEQLAKLTGEMPKKDKQKLLEEADIKNGSFLDKS-FDLDTDFIDVLKKILDEYGDDLKGYHMPWRFFITNNSSVKRKHVVDLGLFDEGIVRYGFEDYDLGIRLHQAGLTFRLRRDIVSVHQEHPSNCKSV-----DDIRANIAYMCDKYNNIRSLDVHLAFNGPFPPDMTNRIMADIQKLLESQKYDMLLNLFLELLHVVKERNIDPDWRKKSPRVTAKSFDLQTVRKLLPKAKKKLGVNDFANALYALVNDLLHVDLRSLDVV
5AJO Chain:A ((136-397))PATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKI--EKVRVLRNDRREGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINM----DNF--------QYV--------GA-SAD----LKGGFDWNLVFKW----DY-MTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYY----------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5AJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1359 -97046 -71.41 -382.07
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -71.41
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.280

(partial model without unconserved sides chains):
PDB file : Tito_5AJO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AJO-query.scw
PDB file : Tito_Scwrl_5AJO.pdb: