Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKSIWIAWKDVKIRITDRKGFMMLILMPLILTCILGAALGSVVDGGSRIDDIKVGYIQSDQSDTANMFTKDVLKKMKSIKVTKVGSKDKMKKLIDEKKIDVGIVIPNHWEAGKTSAVVNAAPDQTLKSSIIETAASSFIEQYKAVKEAASGSMDYISKTEAVKQGKLDPAQFAEKLAKTLEKETGDKLTIAEKSVGSKAVTSFQYYSAAMLCMFMLFHITVGAKSFLQEKDTETLARMLMTPAQKSVILFG---KWLGTYLFAIIQFFIFLIVTINVFGVDWGGNLLLVSVLGLSYAAAVSGISMLLASCISDMKTADAIGGFGIQLLAVLGGSMLPLYQFPDVLQSVSKAVPNRWALDGFLSLMEGGGWADLQKPVLLFAAIGFCSLVIGIRRLHTR
3IRS Chain:A ((3-283))LK----------------------------IIDFRLRPPAMGFLNA-------------RIYTRPDIRNRFTRQLGFEPAPSAEEKSLELMFEEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDKFHPVGSIEAATRKEAMAQMQEILDL-----GIRIVNLEPGVWATPM-----------------HVDDRRLYPL-YAFCEDNGIPVIMMTGGNAGPDITYTNPEHIDRVLGDFPDLTVVSSHGNWPWVQEIIHVAFRR----------------PNLYLSPDMYLYNLPGHADFIQAANSFLADR---------------MLFGTAYPMCPLKEYTEWFLTLPIKPDAMEKILH-----------------------GNAERLLAQAGR


General information:
TITO was launched using:
RESULT:

Template: 3IRS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1649 -194510 -117.96 -699.67
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -117.96
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.282

(partial model without unconserved sides chains):
PDB file : Tito_3IRS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IRS-query.scw
PDB file : Tito_Scwrl_3IRS.pdb: