Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MTPTKQHKKETFTHFIFRVFMILVGAASAAVSIELFLIPNDFIDGGIIGVSLILDHLFMSNPFLNFAFFVVILNIPFMIFGYKYIGKTFLVSTFIGIVGLAVIESSLHHVEAITTQPILATVFGGLLLGFGVGLVIRNGGSMDGTEILGILLTKKLPFSVGEFV--MFINVFIFIWAVFVFGPEQAMYSFMTYYIAMKTIDAVIQGLDETKAVIIVSEQYDEISDAILHRLGRGTTKLKGKGGYTDEEKDVIYAVVTRLEVTKLKSIVFEVDQNAFITIMNTHETRGGKFKNAIH 3J6V Chain:J ((1-201)) ---------------------MAVRAVFGALGRRLWQGSKNFSVSSSRSNIAKNDGFLLSTSM------------KWVQFSNLHVD---------------VPKDLTKPTITISDEP------DTLYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISVKVHEPPRKIERFTLLKSVHIFKKHRVQYEMRTLYRCLE-----LEHLTGSTADVYLEYIQRNLPEGVAMEVTK--TRLEQLPEH-------------------IKKPVWE-----------TTPEEKGDSKS---

General information: TITO was launched using: RESULT: Template: 3J6V.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 786 -40627 -51.69 -204.16 target 2D structure prediction score : 0.34 Monomeric hydrophicity matching model chain J : 0.61 3D Compatibility (PKB) : -51.69 2D Compatibility (Sec. Struct. Predict.) : 0.34 1D Compatibility (Hydrophobicity) : 0.61 QMean score : 0.126

(partial model without unconserved sides chains): PDB file : Tito_3J6V.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3J6V-query.scw PDB file : Tito_Scwrl_3J6V.pdb: