Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSKKKQIKLGVFLAGTGHHVASWRHPDAPSDASMNLDYFKELAKTAERGKLDMLFLADSLSIDSKSHPNVLTRFEPFTLLSALAQVTSKIGLTAT-ASTTYSEPFHIARQFASLDHLSNGRAGWNVVTSSIE--STALNFSGEKHLEHHLRYQRAEEFVEIVKGLWDSWEEDAFIRNKETGEFFDKEKMHELNHKGEYFSVRGPLNVSRTPQGQPVIIQAGSSGDGKALAAKTAEVIFTAQN-HLESAQEFYQSIKEQAAEFGRDPEKIAIMPGIFPIIADTEEAAQAKYKELQDLIIPSVGLQILQNYLGGIDLSAYPLDGPLPKLDAEASNAVKSRFKLVQEMAERDNMTIRELYKYVAGSRGHHIFVGTPEQLADKMQEWVDTKACDGFNIMPPLL-----PEGIEVFVDQVVPILQERGVFRKEYEGTTLREHFGLEKPVNRYAK
4US5 Chain:A ((4-337))------HVKLSVVEQA----PVVEGL-----TPAHSLQHSIELARLADRLGYERFWVAEHHAEIFN------AVPAPEILIARIAAETSGIRVGSGGVLLSLYSPLKVAEVFRTLHALYPDRIDLGIGRANRVKLPVFAALRDD-------SSDDLWRRLEQLRAYLDP---------------------D----SGLPFT-----VSPRMP-GGPALWLLGASVSSAEAAARLGLPYAYAHFITPQFTREAMDTYRAAFVPGPDTP-SPRPILSVVVCCAETDAEAQRVYATHRLFHRRMS-----QGDVR-----LLPPA-DLA------------VA----EMD---KPGPDPLAEESF--EWPRYVVGSPDRVRDQLTKMADATGAEELGVVSMIHDQRDRLRSYRLLAEAFELTP------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4US5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1756 -72337 -41.19 -226.76
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -41.19
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_4US5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4US5-query.scw
PDB file : Tito_Scwrl_4US5.pdb: