Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKNILLVGMLVLLLMFVSACSGTASKGSSSDSASEKTEMRTYKSPKGNVNIPAHPKRIVTDF--YAGELLSVGANVVGSGSWS--FDN----PFL--KSKLK---NVKDVGD-PISVEKVMELQPDLIVVMNE------ENVDKLKKIAPTVVIPYNTAKNVEDTVSMFGDIAGAKDQAKSFMADFNKKAEAAKKKIAGVIDKDATFGIYENTDKGEFWVFNDNGGRGGQAVYNALGLKAPEKIEQDV-----IKKGEMKQLSQEVIPE-YAADYMFITDYNPKGESKTLDKLENSSIWKNLDAVKHNRVFINDFDSFYPYDPISVSKQVDIITDMLIKRAEENKK
3TLK Chain:A ((27-320))------------------------------------ADWPRQITDSRGTHTLESQPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLYIGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYD-DKSWQSLLTQLGEITGHEKQAAERIAQFDKQLAAAKEQIKLP-PQPVTAIVYTAAA-HSANLWTPE-SAQGQ-MLEQLGFTLAKLPAGLNASQSQGKRHDIIQLGGENLAAGLNGESLFLFAGDQ----KDADAIYANPLLAHLPAVQNKQVYALGTETF-RLDYYSAMQVLDRLKALFLE-------


General information:
TITO was launched using:
RESULT:

Template: 3TLK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1372 73117 53.29 272.82
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 53.29
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_3TLK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TLK-query.scw
PDB file : Tito_Scwrl_3TLK.pdb: