Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MY--NELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFK-AKKPAVPAKPDRDEALR
1XL3 Chain:C ((2-92))
AYDLSEFMGDIVALV-DRWAGIHDIEHLANAFSLPTPEIVRFYQDLRMFRLF------------------------PLGVFSDEEQRQNLLQMCQNAIDMAIESEEEELSELD
General information:
TITO was launched using:
RESULT:
Template:
1XL3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50798 for 486 contacts (-104.5/contact) +
2D Compatibility (PS) -8699 + (NN) 1611 + (LL) 2856
1D Compatibility (HY) -6000 + (ID) 750
Total energy: -61780.0 ( -127.12 by residue)
QMean score : 0.211
(partial model without unconserved sides chains):
PDB file :
Tito_1XL3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XL3-query.scw
PDB file :
Tito_Scwrl_1XL3.pdb
: