Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKITGTVVKLGIVSVVLLFFTVMIIVIFGQMRFDRTNGYTAEFSNVSGLRQGQFVRASGVEIGKVKALHLVDGGRRVRVEFNIDRSVPLYQSTTAQIRYSDLIGNRYVELKRGEGKGANDLLPPGGLIPLSRTSPALDLDALIGGFKPVFRALDPAKVNNIANALITVFQGQGGTINDILDQTAQLTSQIAERDQAIGEVVKNLNIVLDTTVKHRKEFDETVNNLENLITGLRNHSDQLAGGLAHISNGAGTVADLLAENRTLV---RKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWNGFQAGGPVRTVKLFSQPTGRCTPQ |
| 4RFX Chain:A ((432-531)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVETLTERNLDLEEKVRELRETVGDLEAMNEMNDELQENARETELELREQLDLAAARVREAEKRVEAAQETVADYQQTIKKYRELTAHLQDVNRELMSQQ---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RFX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 282 for 377 contacts (0.7/contact) +
2D Compatibility (PS) -10052 + (NN) -2240 + (LL) 14808
1D Compatibility (HY) 800 + (ID) 800
Total energy: 2798.0 ( 7.42 by residue)
QMean score : 0.355
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