Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVVVEKTPTTLPQATPNGAAPWHVRAGAFAIDVLPGLAVAATMALTALTVPPGSAWRWLCACLLGLTILLLAVNRLLLPTITGWSLGRALTGIRVVRRDGSAIGPWRLLVRDLAHLVDTLSLFVGWLWPLWDSRRRTFADLLLRTEVRRVEPVQRPAVIRRLTAAVALAAAGACASATAVGAAVVYVNEWQTDHTRAQLATRGPKLVVDVLSYDPETVQRDFERARSLATDRYRPQLSIQQDSVRESGPVRNQYWVTDSAVLSATPAQATMLLFMQGERGTPPNQRYIQSTVRAIFQKSRGQWRLDDLAVVMKPRQPTGEK |
1G8Y Chain:A ((2-263)) | ----ATHKPINILEAFAAAPPP----LDYVLPNMVAG-------TVGALVSPGG----------AGKSMLALQLAAQIAGGPDLLEVGELPTG-PVIYLPAE--DPPTAIHHRLHALGAHLS---------AEERQAVADGLLIQPLIGSLPNIMAPEWFDGLKRAAE-------------GRRLMVLDTLRRFHIEEE--------------NASGPMAQVIGRMEAIAADTGCSIVFLHHAVLVDNIRWQSY-------LSSMTSAEAE-------EWGVDDDQRRF--FVRFGVSKANYGAPFADRWFRRHDGGVLKPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59609 for 1890 contacts (-31.5/contact) +
2D Compatibility (PS) -26037 + (NN) -15011 + (LL) 8540
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -102267.0 ( -54.11 by residue)
QMean score : 0.332
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