Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDDERFSLLVGLTGASDLWPVRDERIPQGVPMC-AGYVPGIPRLGVPALLMSDAGLGVTNPGYR----PGDTATALPAGLALAASFNPVLARSSGKAIGREARSRGFNVQLAGAINLARDPRNGRNFEYLSEDPLLSATMAAESIIGIQQQGVIATTKHFSLNCNETNRHWLDAVIDPDAHRESDLLAFEIVIERSQPGAVMAAYNKVNGDYAAGNDHLLNDVLKGAWGYRGWVMSDWGGTPSW-ECALAGLDQEC-GAQIDAVLWQSEAFTDRLRAAYADGNLPKGRLSDMVRRILRSMFAVGIDRWKP--APAPDMNAHNEIAAQMARQGIVLLQNRGLLPLAPESAGRIAVIGGYAHLGVPAGYGSSAVTPPGG-Y--AGVIPIGGSGLAA--GLRNLYLL---PSSPLSELRKRLPNAQFE--FDP-GINPAEAVLAARRADIAIVFAIRAEGEGFDSA----DLSLPWGQDALIAAVAS----ANANTVVVLETGNPVTM-PWRDSVNAIMQAWYPGQAGGQAVAEIVTGQVNPSGRLPITFPVDLGQTPRSQPPELGAPWGTSTTIHYTEGADVGYRWFASTNQTPMFAFGHGLSYTSFEYRDLVVTGGHTV-HASFSVTNTGDRSGADVPQLYMIAAP-G-ESR-LRLLGFERVE-LEPGQTRRVRIEADPRLLARYDGEARSWRIEPGGYTVAVGASAVALKLAAKVKLAGRGFGR |
| 2X41 Chain:A ((11-716)) | LTLEEKVKLVVGVGLPGLF------GNPHSRVAGAAGETHPVPRVGLPAFVLADGPAGLRINPTRENDENTYYTTAFPVEIMLASTWNRELLEEVGKAMGEEVREYGVDVLLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQGVGACIKHFVANNQETNRMVVDTIVSERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKYCSQNEWLLKKVLREEWGFEGFVMSDWYAGDNPVEQLKAGNDLIMPGKAYQVN-TERRDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAPSF-KNYRYSNKPDLEKHAKVAYEAGAEGVVLLRNEEALPLSEN--SKIALFGTGQIETIKGGTGSGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRR------IIKPKLPENFLSEKEIHKLAKKNDVAVIVISRISGEGYDRKPVKGDFYLSDDETDLIKTVSREFHEQGKKVIVLLNIGSPVEVVSWRDLVDGILLVWQAGQETGRIVADVLTGRINPSGKLPTTFPRDYSDVPSWTFPG--EPKDNPQKVVYEEDIYVGYRYYDTFGVEPAYEFGYGLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIPVRDLASFNG--EEWVVEAGEYEVRVGASSRNIKLKGTFSVGEE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -267225 for 6148 contacts (-43.5/contact) +
2D Compatibility (PS) -72589 + (NN) -40659 + (LL) 1132
1D Compatibility (HY) -38800 + (ID) 11450
Total energy: -429591.0 ( -69.87 by residue)
QMean score : 0.447
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