Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVAVDSDAEDDAVSEIAEAAGVSPAPAKPSMSAPRRMLLFGLVVVVA-------------LAVLLCCWGFRVQRARHAQ-DQRGH-FLQAARQCALNLT-TIDWRNAEADV---RRILDGATGEFYNDFAQRSQPFV-EVLRHAKASTVGTITEAGLQTQTADTA----QALVA--------------------VSVQTSNAGEA-DPVPRAWRMRITVQRVGDRVKVSDVGFVP-------------- |
| 3TZG Chain:A ((28-272)) | ----------DTYVTKVTDLTGEEEQVLKLEYDRDGKIIKYGDTPVRYEGDQITIGQMNKLCNVTFQIGKGKARESRARCMLKVGEEVYEADKQTVYDYKGDTIFINSDYRATSDYRFLKKVQGKYVFDQLGR-LKEVMTVFTEANDSVSSCHTYYNYDNNINYQANLNLQAYVIDYDGVDSFFYFLLNLGQLRNRTALPNDIGYCMNHGLSTYNVHANYRLDDENPVRIEVLYNYTKLLSRIDLSYNPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TZG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -471 for 1028 contacts (-0.5/contact) +
2D Compatibility (PS) -18313 + (NN) 5275 + (LL) 748
1D Compatibility (HY) 4400 + (ID) 650
Total energy: -9011.0 ( -8.77 by residue)
QMean score : -0.027
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