Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTHAATMRVRAGVRSSPLLLHAGTPPTAAAAESGMRTLVTGSSGHLGEALVRTLRARGADIVSLDSRP-----SRYTNIVGCVSDRALLRDVMAGVEVVFHAAAHHKPQLAFLPRQAFLDTNIIGTQTVLDAAVAANVRAFVMTSSTTVFGDALTPPADQPAAWIDESVTPIPKNIYGVTKASSEDLCQLAHRNDGLACVVLRVARFFVEGDDMPDLYDGRSQDNIKANEYACRRVAL---EDAVDAHLNAAQRAPQLGFGRYLVSATTPFTRDDLTQLRTDAASVFARRVPLAAAVWTQRGWRFPDRLDRVYVNSRARRDLNWRPRFDLNAVAARLARGQSVHTPLSQLVGSKAYAHSSYHRGVFAPARP--- |
| 3RFT Chain:A ((1-266)) | --------------------------------MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEK----PFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTER------LGPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNNY-------------------RMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAN----------------------------------------DAGWWDNSHLGFLGWKPKDNAEAFRRHITETTPPPDPND--------ALVRFQGGTFVDNPIFKQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131634 for 2153 contacts (-61.1/contact) +
2D Compatibility (PS) -26981 + (NN) -9957 + (LL) 7292
1D Compatibility (HY) -9200 + (ID) 2800
Total energy: -173280.0 ( -80.48 by residue)
QMean score : 0.438
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