Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRTALALPLFLLVSACSSEPTPPPKPAAKPQARTVISPRPVRQSVQPILPLRGDYANNPAAQHFIDRMVSQHGFNRQQLHDLFAQTQRLDWVIRLMDRQAPTYTPPSGPNGAWLRYRKKFVTPGNVQNGVLFWDQYETDLQRASRVYGVPPEIIVGIIGVETRWGRVMGKTRIIDALSTLSFSYPRRAEFFSGELEQFLLQARKEGTDPLALRGSYAGAMGYGQFMPSSFTK----------YAVDFDGDGHIDLWN--PRDAIGSVANYFKQ-HGWVSGDRVAVPASGRAPSLEDGFKTLYPLDVLASAGLRPQGPLGGHRQASLLRLDMGRNYQYWYGLPNFYVITRYNHSTHYAMAVWELGKEVDRVRHRSVVRQD |
2GV0 Chain:A ((20-107)) | -------------------------------------------------------------------------------------------------------------------------------------------------GYHGYSLGDWVCTAKHESNFNTAATNYN----------------------------------------RGDQSTDYGILQINSRWWCNDGKTPKAKNACGIE-----CSELLKADITAAVNCAKRIVRDPNGM------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31098 for 515 contacts (-60.4/contact) +
2D Compatibility (PS) -7380 + (NN) 1110 + (LL) 16968
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -23300.0 ( -45.24 by residue)
QMean score : 0.262
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