Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYLETPKKFRSLANQAHQVAENYFRPISRKYDKAEHAYPKELDLLAALLDGMNSGSPEAVGATSASKRAGKQVEEGIKNGGNLSALLGVMELCWGDVGLLLAMPRQGLGNAAIAAVANEEQLQRFGGTW------AAMAITEPGCGSDSAAIRTTATQDGDHYVLNGEKIFVTSGERADAVVVWATLN---RNLGRAAIKSFVVEKGTPGMTVTRLEKKLGIKASDTASISFNDCRVPAANLLGNAEVDVQKGFAGVMETFDNTRPLVAGMAVGVAKAALDRTRELLKKAGCKFDYRKPLLTVSHAEATLYRLEAEWEAARLLTLKAAWMADNKLPNSKEASIAKAKAGRVANEITLKCVELAGALGYAEDELLEKWARDSKILDIFEGTQQIQLLIVARRLLGKSSSQLK |
1EGE Chain:B ((16-393)) | -FTEQQKEFQATA---RKFAREEIIPVAAEYDKTGE-YPVPLIRRAWELGLMNTHIPENCGGLGL---------------GTFDACLISEELAYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVL----IGDGAGFKVAMGAFDKTRPVVAAGAVGLAQRALD---EATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQIYEGTSQIQRLIVAREHIDK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EGE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133368 for 3345 contacts (-39.9/contact) +
2D Compatibility (PS) -40837 + (NN) -22112 + (LL) 1596
1D Compatibility (HY) -17600 + (ID) 6900
Total energy: -219221.0 ( -65.54 by residue)
QMean score : 0.440
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