Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFDLDDPSFQLDGYFLYACDAELPEQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGQSGDESLNQKFKFMDDFTHYLSKQRRKRREYIYCGSLYVAHQKMDVKNWRECQQMPGFLAPERAWLDEVFGNLGYADALREVSREGDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLRRFVRNAKLPRQPRFSQHAPLIVDYDWQLSI
3G3Y Chain:B ((4-251))
LKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFFTPAERKGYSGVAMYTKVPPSSLREGFGVERFDTEGRIQIADFDDFLLYNIYFPNGKMSEERLKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIEN-GYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWILSDVMGSDHCPI----------
General information:
TITO was launched using:
RESULT:
Template:
3G3Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130587 for 1992 contacts (-65.6/contact) +
2D Compatibility (PS) -26331 + (NN) -13352 + (LL) 1140
1D Compatibility (HY) -20000 + (ID) 4000
Total energy: -193130.0 ( -96.95 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_3G3Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G3Y-query.scw
PDB file :
Tito_Scwrl_3G3Y.pdb
: