Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKCLLLALALTCGAQALIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
1BSO Chain:A ((1-162))
----------------LIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENDECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLVCQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
General information:
TITO was launched using:
RESULT:
Template:
1BSO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98615 for 1209 contacts (-81.6/contact) +
2D Compatibility (PS) -16695 + (NN) 372 + (LL) 1840
1D Compatibility (HY) -24000 + (ID) 8000
Total energy: -145098.0 ( -120.01 by residue)
QMean score : 0.419
(partial model without unconserved sides chains):
PDB file :
Tito_1BSO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BSO-query.scw
PDB file :
Tito_Scwrl_1BSO.pdb
: