Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFSGNWKIIRSENFEEMLKALGVNMMMRKIAVAAASKPAVEIKQENDTFYIKTSTTVRTTEINFKIGEEFEEQTVDGRPCKSLVKWESGNKMVCEQRLLKGEGPKTSWSRELTNDGELILTMTADDVVCTRVYVRE
3CWK Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKVSTTVRTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTLELTNDGELIETMTADDVVCTKVFVRE
General information:
TITO was launched using:
RESULT:
Template:
3CWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35090 for 992 contacts (-35.4/contact) +
2D Compatibility (PS) -15401 + (NN) -5622 + (LL) 208
1D Compatibility (HY) -17600 + (ID) 6150
Total energy: -79655.0 ( -80.30 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_3CWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CWK-query.scw
PDB file :
Tito_Scwrl_3CWK.pdb
: