Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALKSLVLLSLLVLVLLLVRVQPSLGKETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
4G8V Chain:A ((1-124))--------------------------KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV


General information:
TITO was launched using:
RESULT:

Template: 4G8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39575 for 909 contacts (-43.5/contact) +
2D Compatibility (PS) -13660 + (NN) -7286 + (LL) 3136
1D Compatibility (HY) -14000 + (ID) 6200
Total energy: -77585.0 ( -85.35 by residue)
QMean score : 0.431

(partial model without unconserved sides chains):
PDB file : Tito_4G8V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G8V-query.scw
PDB file : Tito_Scwrl_4G8V.pdb: