Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHS-LDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
1OI6 Chain:A ((1-200))
MQARKLAVDGAIEFTPRVFADDRGLLILPYQEEAFVEAHGGPLFRVAQTIHSMSKRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMSYMLSRSYVTQDELALSALDPALGLPIDIG--VEPIVSDRDRVAITLAEAQRQGLLPDYTTSQEIERRLTA-
General information:
TITO was launched using:
RESULT:
Template:
1OI6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102598 for 1668 contacts (-61.5/contact) +
2D Compatibility (PS) -21398 + (NN) -9315 + (LL) -196
1D Compatibility (HY) -16800 + (ID) 4000
Total energy: -154307.0 ( -92.51 by residue)
QMean score : 0.804
(partial model without unconserved sides chains):
PDB file :
Tito_1OI6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OI6-query.scw
PDB file :
Tito_Scwrl_1OI6.pdb
: