Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPPKRFCPSPSTSSEGTRIKKISIEGNIAAGKSTFVNILKQASEDWEVVPEPVARWCNVQSTQEEFEELTTSQKSGGNVLQMMYEKPERWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTSFDYLQEVPVLTLDVNEDFKDKHESLVEKVKEFLSTL
2ZI5 Chain:C ((39-279))
-------------------RIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWS-------------MSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLN------EKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQF---LELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
2ZI5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105508 for 1710 contacts (-61.7/contact) +
2D Compatibility (PS) -22804 + (NN) -4908 + (LL) 1392
1D Compatibility (HY) -32000 + (ID) 10250
Total energy: -174078.0 ( -101.80 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_2ZI5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZI5-query.scw
PDB file :
Tito_Scwrl_2ZI5.pdb
: