Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLPTAQEVQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGGGKVRACLTGPVRASHNGCGAMPFRVEMVWNGQPCALDVIDVMRFDEHGRIQTMQAYWSEVNLSVREPQ
3FZW Chain:B ((3-130))
--LPTAQEVQGLMARYIELVDVGDIEAIVQMYADDATVENPFGQPPIHGREQIAAFYRQGLGGGKVRACLTGPVRASHNGCGAMPFRVEMVWNGQPCALDVINVMRFDEHGRIQTMQAYWSEVNLSVREP-
General information:
TITO was launched using:
RESULT:
Template:
3FZW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72479 for 944 contacts (-76.8/contact) +
2D Compatibility (PS) -14276 + (NN) -5956 + (LL) 248
1D Compatibility (HY) -18400 + (ID) 6300
Total energy: -117163.0 ( -124.11 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_3FZW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FZW-query.scw
PDB file :
Tito_Scwrl_3FZW.pdb
: