Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPIMGSSVYITVELAIAVLAIL-GNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITI---STGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTP-MLGWNNCGQPKEGKNHSQ-GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAGTSARVLAAHGSDGEQVSLRLNGHPPGVWANGSAPHPERRPNGYALGLVSGGSAQESQGNTGLPDVELLSHELKGVCPEPPGLDDPLAQDGAGVS
4AMI Chain:B ((14-299))---------MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVT-ASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGC------CDF--VTNRAYAIASSIIS-FYIPLLIMIFVALRVYREAKEQIRK----------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDL--VPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLL-------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4AMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -294420 for 2000 contacts (-147.2/contact) +
2D Compatibility (PS) -28067 + (NN) -12551 + (LL) 4292
1D Compatibility (HY) -33200 + (ID) 5300
Total energy: -369246.0 ( -184.62 by residue)
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_4AMI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AMI-query.scw
PDB file : Tito_Scwrl_4AMI.pdb: