Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNCLHRAELSPSTENSSQLDFEDVWNSSYGVNDSFPDGDYGANLEAAAPCHSCNLLDDSALPFFILTSVLGILASSTVLFMLFRPLFRWQLCPGWPVLAQLAVGSALFSIVVPVLAPGL--GSTRSSALCSLGYCVWYGSAFAQALLLGCHA-------SLGHRLGAGQVPGLTLGLTVGIWGVAALLTLPVTLASGASG-----GLCTLIYSTELKALQATHTVACLAIFVLLPLGLFGA---KGLKKA-------LGMGPGPWMNILWAWFIFWWPHGVVLGLDFLVRSKLLLLSTCLAQQALDLLLNLAEALAILHCVATPLLLALFCHQATRTLLPSLPLPEGWSSHLDTLGSKS |
| 2LNL Chain:A ((38-322)) | --------------------------------------------------------NKYVVIIAYALVFLLSLLGNSLVMLVILYS--RVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLT-QKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVI-QESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224977 for 1841 contacts (-122.2/contact) +
2D Compatibility (PS) -25888 + (NN) 1805 + (LL) 1924
1D Compatibility (HY) -24000 + (ID) 2600
Total energy: -273736.0 ( -148.69 by residue)
QMean score : 0.192
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