Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MDHCGALFLCLCLLTLQNATTETWEELLSYMENMQVSRGRSSVFSSRQLHQLEQMLLNTSFPGYNLTLQTPTIQSLAFKLSCDFSGLSLTSATLKRVPQAGGQHARGQHAMQFPAELTRDACKTRPRELR-LICIYFSNTHFFKDENNSSLLNNYVLGAQLSHGHVNNLRDPVNISFWHNQSLEGYTLTCVFWKEGARKQPWGGWSPEGCRTEQPSHSQVLCRCNHLTYFAVLMQLSPALVPAELLAPLTYISLVGCSISIVASLITVLLHFHFRKQSDSLTRIHMNLHASVLLL--NIAFLLSPAFAMSPVPGSA-----CTALAAALHYALLSCLTWMAIEGFNLYLLLGRVYNIYIRRYV--------FKLGVLGWGAPALLVLLSLSVKSSVYGPCTIPVFDSWENGTGFQNMSICWVRSPVVHSVLVMG---------YGGLTSLFNLVVLAWALWTLRRLRERADAPSVRACHDTVTVLGLTVLLGTTWALAFFSFGVFLLPQLFLFTILNSLYGFFLFLWFCSQRCRSEAEAKAQIEAFSSSQTTQ----------- |
| 4JO0 Chain:A ((1-534)) | SHMRYSLRQDIAVEPVIAGWYGWSYLLPPQTLARFVHNRFNRIVESYLD-----------DPQVHAAAVRQRRMHGGPWIHAHEHRDAIEAWYRETAPRRERLDELFEAVRRLEEDILPRHHGECLDPVYQEL--------PAALAGRVEVFYGRDN--------------------RTADYRFVEPLMYASEYYDESWQQVRFRPV----TEDAREFALTTPM--LEYGPEQLLVNVPLNS-PLLDAVFRGGLTGTELDDLAAR--FGLDGERAARFASYFEP---------TPEEDVLEYVGHACVFARHRGTTFLVDPVLSYSGYPGGAENRFTFADLPERIDHLLITHNHQDHMLFETLLRIRHRVGRVLVPKSTNASLVDPGLGGILRRLGFTDVVEVDDLETLSCGSAEVVALPFLGEHGDLRIRSKTGWLIRFGE-RSVLFAADSTNISPTMYTKVAEVIGPVDTVFIGMESIGAAASWIYGPLYGEPLDRRTDQSRRLNGSNFPQAREIVDALEPDEVYVYAMGLEPWMGVVMAVDYDESHPAIVDSDLLVRHVQDKGGTAERLHLRRTLRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JO0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -369185 for 3726 contacts (-99.1/contact) +
2D Compatibility (PS) -48952 + (NN) -6591 + (LL) 4180
1D Compatibility (HY) -7200 + (ID) 2700
Total energy: -430448.0 ( -115.53 by residue)
QMean score : 0.197
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