Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDGDNQSENSQFLLLGISESPEQQRILFWMFLSMYLVTVLGNVLIILAISSDSHLHTPMYFFLANLSFTDLFFVTNTIPKMLVNFQSQNKAISYAGCLTQLYFLVSLVTLDNLILAVMAYDRYVATCCPLHYVTAMSPGLCVLLLSLCWGLSVLYGLLLTFLLTRVTFCGPREIHYLFCDMYILLWLACSNTHIIHTALIATGCFIFLTPLGFMTTSYVRIVRTILQMPSA-----------SKKYKTFSTCASHLGVVSLFYGTLAMVYLQPLHTYS-------MKDSVATVMYAVLTPMMNPFIYRLRNKDMHGAPGRVLWRPFQRPK
2KS9 Chain:A ((34-324))-------------------------LWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL--SATATKVVICVIWVLALLLAFPQGYYSTTET-----MPSRVVCMIEWPEH---PNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISA


General information:
TITO was launched using:
RESULT:

Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -274490 for 2153 contacts (-127.5/contact) +
2D Compatibility (PS) -26961 + (NN) -1035 + (LL) 1760
1D Compatibility (HY) -18000 + (ID) 2400
Total energy: -321126.0 ( -149.15 by residue)
QMean score : 0.198

(partial model without unconserved sides chains):
PDB file : Tito_2KS9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KS9-query.scw
PDB file : Tito_Scwrl_2KS9.pdb: