Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MLGRCFPPDTKEKQQLRMTKLCDPAESELSPFLITLI-LAVLLAEYLIGIIANGFIMAIHAAEWVQ-----NKAVSTSGRILVFLSVSRIALQSLMMLEITISSTSLSFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANFSYPLF---LKLRWRITGLIPWLLWLSVFISFSHSMFCINICTVYCNNSFPIHSSNSTKKTYLSEINVVGLAFFFNLGIVTPLIMFILTATLLILSLKRHTLHMGSNATGSNDPSMEAHMGAIKA----ISYF-LILYIFNAVALFIYLSNM-FDINSLWNNLCQIIMAAYPASHSILLIQDNPGLRRAWKRLQLRLHLYPKEWTL |
4TNW Chain:A ((1-342)) | SDSKILAHLFTSGYDFRVRPPTDN-GGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLS--CPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLP---SFQLTNTSTTYCTSV----TNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWV-SFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALLEFALVNHIANAGTTEWNDISKRVDLISRALFPVLFFVFNILYWSRFGHHH---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -286176 for 2243 contacts (-127.6/contact) +
2D Compatibility (PS) -32996 + (NN) 6893 + (LL) 1280
1D Compatibility (HY) -14400 + (ID) 2400
Total energy: -327799.0 ( -146.14 by residue)
QMean score : 0.100
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