Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MATVNTDATDKDISKFKVTFTL---VVSGIECITGILGSGFITAIYGAEW--ARGKTLPTGDRIMLMLSFSRLLLQIWMMLENIFSLLFRIVYNQNSVYILFKVITVFLNHSNLWFAAWL-------KVFYCLRIANFNHPLFFLMKRKIIVLMPWLLRLSVLVSLS---FSFPLSRDVFNVYVNSSIP-IPSSNSTEKKYFSETNMVNLVFFYNMGIFVPLIMFI----LAATLLILSLKRHTLHMGSNATGSRDPSMKAHIGAIKATSYF-LILYIFNAIALFLSTSNIFDTYSSWNILCKIIMAAYPAGHSVQLILGNPGLRRAWKRFQHQVPLYLKGQTL------------------------------------ |
| 1BUC Chain:A ((1-383)) | MDFNLTDIQQDFLKLAHDFGEKKLAPTVTERDHKGIYD--KELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMTDKS---KGNHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQ---DVKVPAENMLGEEGKGFKIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGKPFTVDAAIAKRVASDVAMRVTTEAVQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -327571 for 2705 contacts (-121.1/contact) +
2D Compatibility (PS) -32503 + (NN) -96 + (LL) 256
1D Compatibility (HY) -3200 + (ID) 1750
Total energy: -364864.0 ( -134.89 by residue)
QMean score : 0.257
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