Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLRLFYFSAIIASVILNFVGIIMNLFITVVNCKTWVKSHRISSSDRILFSLGITRFLMLGLFLVNTIYFVSSNTERSVYLSAFFVLCFMFLDSSSVWFVTLLNILYCVKITNFQHSVFLLLKRNISPKIPRLLLACVLISAFTTCLYITLSQASPFPELVTTRNNTSFNISEGILSLVVSLVLSSSLQFIINVTSASLLIHSLRRHIQKMQKNATGFWNPQTEAHVGAMKLMVYFLILYIPYSVATLVQYLPFYAGMDMGTKSICLIFATLYSPGHSVLIIITHPKLKTTAKKILCFKK |
4PKY Chain:B ((2-50)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFEVLALQASLRKAQMQNHSLEMTLEQKTKEIDELTRICDDLISKMEKI-------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 653 for 190 contacts (3.4/contact) +
2D Compatibility (PS) -4931 + (NN) 412 + (LL) 22948
1D Compatibility (HY) 400 + (ID) 350
Total energy: 19132.0 ( 100.69 by residue)
QMean score : 0.130
|
|
|