Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------AISCGQVNSALASCVSYAKGSGASPPGAC---CSGVRRLAGLAR-----------STADKQAACRCIKS--------AAGGLNPGKAASIPSKCGVSIPYSISASVDCSKIH-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA------GSVVDALRAVRNA--APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAE-TGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25817 for 401 contacts (-64.4/contact) +
2D Compatibility (PS) -8446 + (NN) -4613 + (LL) 48
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -41928.0 ( -104.56 by residue)
QMean score : 0.375
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