Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VVQCGQVTQLMAPCMPYLS----GAPGMTP----YGICCNSLGVLNQLAASTADRVAACNCVKAAASGFP-------A---VD----------FSRAAAL--PAACGLAINFAVTPNMDCNQVTDEP
1BEA Chain:A ((15-110))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS---------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58716 for 398 contacts (-147.5/contact) +
2D Compatibility (PS) -6391 + (NN) 1560 + (LL) 1952
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -63995.0 ( -160.79 by residue)
QMean score : 0.231
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: