Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSCSTVYNELMPCLGYVQS----GGA-V-----RRACCSGIKTLVSRARAKPDRRAACACLKTVAAAAAG------G---P-Y---------LGRAAGL--PGKCGVQPPFKIDPNVNCNAV
1BEA Chain:A ((15-109))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36831 for 394 contacts (-93.5/contact) +
2D Compatibility (PS) -6636 + (NN) -3634 + (LL) 1760
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -50241.0 ( -127.52 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: