Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCNAVQANLYPCVVYVVQ----GGA------IPYSCCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYS-------------S--I----YLKKAAALPGKCGVKLPYKIDPSTNCNSIK
1B1U Chain:A ((15-109))
--------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51606 for 409 contacts (-126.2/contact) +
2D Compatibility (PS) -6327 + (NN) 1048 + (LL) 1404
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -57981.0 ( -141.76 by residue)
QMean score : 0.038
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: